Information for 11-CKGCCAGGVCCTRMGG (Motif 18)

A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
Reverse Opposite:
A G T C A T G C A C G T A G C T G T C A T C A G T A C G A G C T G A T C T G A C G A C T A C T G T A C G G T A C T G A C A T C G
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.613
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif4.61%
Number of Background Sequences with motif415.8
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets43.4 +/- 23.3bp
Average Position of motif in Background51.7 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CKGCCAGGVCCTRMGG
GGGGCCGAGGCCTG---
 A C G T A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CKGCCAGGVCCTRMGG
ATGCCCGGGCATGT--
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CKGCCAGGVCCTRMGG
-GGCCACRCCCMK---
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CKGCCAGGVCCTRMGG
--GCCMCRCCCH----
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CKGCCAGGVCCTRMGG
-GACCACGCCCTTATT
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CKGCCAGGVCCTRMGG
--GCCCCACCCA----
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CKGCCAGGVCCTRMGG
-GGGCGGGACC-----
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CKGCCAGGVCCTRMGG
CTGCCCGCA-------
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CKGCCAGGVCCTRMGG
TTGCCAAG--------
 A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CKGCCAGGVCCTRMGG
GGGGGCGGGGCC-----
 A C G T A T G C A C T G A C T G A G T C G T A C C T G A A C T G C A T G T C G A A T G C A G T C C A G T T C G A T G C A T A C G T C A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T