Information for 10-AGGGCCATCCAGG (Motif 15)

C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A T G C A G T C A C G T
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.940
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.2 +/- 18.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGGCCATCCAGG
-GGACCACCCACG
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGGCCATCCAGG-
---TACATCCGGGT
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T
A C G T A C G T A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGGCCATCCAGG
--GGCCATTAAC-
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGGGCCATCCAGG-
----ACATCCTGNT
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGGCCATCCAGG-----
--GTACATCCGGATTTTT
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGGCCATCCAGG---
--NGCTTTCTAGGAAN
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGGGCCATCCAGG
-ATGCCAACC---
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGGGCCATCCAGG-
ACTATGCCAACCTACC
 A C G T A C G T C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGGCCATCCAGG--
--TGCCCTNAGGGCA
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGGGCCATCCAGG--
--TGCCCTGAGGGCA
 C G T A A C T G A T C G A C T G A G T C A G T C C G T A A C G T A G T C A G T C C T G A A C T G A C T G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A