Information for 8-GCGGGGCGGDGCSSGG (Motif 13)

A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
Reverse Opposite:
A G T C A G T C T A G C T A C G A T C G A G T C G A T C A G T C A G T C C T A G A G T C A G T C A G T C A G T C A C T G A G T C
p-value:1e-7
log p-value:-1.733e+01
Information Content per bp:1.781
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif140.1
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets52.8 +/- 26.3bp
Average Position of motif in Background46.2 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GCGGGGCGGDGCSSGG
-GGGGGCGGGGCC---
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GCGGGGCGGDGCSSGG
AGGGGGCGGGGCTG--
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GCGGGGCGGDGCSSGG
-GGGGGCGGGGC----
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCGGGGCGGDGCSSGG
--GGGGNGGGGC----
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGGCGGDGCSSGG
NNVDGGGYGGGGCYN--
 A C G T A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCGGGGCGGDGCSSGG
RGKGGGCGGAGC----
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGCGGDGCSSGG
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCGGGGCGGDGCSSGG
-MKGGGYGTGGCC---
 A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGCGGDGCSSGG
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGCGGDGCSSGG
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C T G G T A C C T A G A C T G C T A G A C T G A G T C A C T G A C T G C A T G A C T G A T G C A T G C A T C G C T A G T A C G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T