Information for 5-GTGCTATTTC (Motif 12)

A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C
Reverse Opposite:
A C T G C G T A C G T A C T G A A C G T C T G A A C T G A T G C C G T A A G T C
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.874
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif35.7
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.2 +/- 27.4bp
Average Position of motif in Background44.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTGCTATTTC----
--KCTATTTTTRGH
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGCTATTTC------
-TTCTATTTTTAGNNN
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTGCTATTTC----
--GCTATTTTTGGM
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGCTATTTC---
---CTATTTTTGG
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTGCTATTTC----
--GCTATTTTTAGC
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTATTTC-
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTATTTC---
CCTTGCAATTTTTNN
 A C G T A C G T A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGCTATTTC
GKMTCADRTTWC
 A C G T A C G T A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGCTATTTC----
NNNCTGATATCTCNNNN
 A C G T A C G T A C G T A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GTGCTATTTC-----
-----ATTTCCTGTN
 A C T G A C G T A T C G T G A C A G C T C G T A A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G