Information for 5-GTTCTTTTAG (Motif 5)

C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G
Reverse Opposite:
A G T C A G C T C G T A G T C A C T G A C T G A C A T G C G T A C G T A G A T C
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.847
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif44.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.0 +/- 25.4bp
Average Position of motif in Background52.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTCTTTTAG---
NNTTTTGTTTTGATNT
 A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTTCTTTTAG---
GNATTTTTTTTTTGANC
 A C G T A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTTCTTTTAG
GAATGTTTGTTT--
 A C G T A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTCTTTTAG---
NNTTTNTTTTNGNNN
 A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTCTTTTAG---
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTCTTTTAG-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTCTTTTAG
NTTTTATTGG
 C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTTTAG---
TTTTTTTTCNNGTN
 A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTTTAG-
TCTATTTTTAGA
 A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTTCTTTTAG---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T C A T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T C T G A C T A G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G