Information for 15-AATAACATTCAAA (Motif 24)

C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
Reverse Opposite:
A C G T C G A T A C G T A T C G G T C A C G T A A C G T A C T G A C G T A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.642e+00
Information Content per bp:1.929
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 15.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AATAACATTCAAA
TNGAATTTCATTNAN-
 A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AATAACATTCAAA----
GACCACATTCATACAAT
 C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AATAACATTCAAA-
-----NATTCAAAT
 C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATAACATTCAAA
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATAACATTCAAA-
NNNTAACAATTATAN
 A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AATAACATTCAAA
AAAAATAACAAACGG-
 A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATAACATTCAAA
AATGCAATAAAATTTAT-
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATAACATTCAAA
CAAACAACAACACCT---
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATAACATTCAAA
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATAACATTCAAA
AACAATAACATTGTT-
 A C G T A C G T A C G T C G T A G T C A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A T G C C G T A C G T A G T C A
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T A C G T