Information for 8-AGGGGATTTG (Motif 12)

T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G
Reverse Opposite:
G T A C C G T A T C G A C G T A A C G T A G T C A T G C A G T C A T G C A C G T
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.843
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif55.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets51.3 +/- 28.5bp
Average Position of motif in Background53.0 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTTG
AAGAGGATTAG
 A C G T T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGGGGATTTG-----
AGGGGGATTAGCTGCC
 A C G T T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTTG---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGGGATTTG
TGGGGA----
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGGGGATTTG
CNGTGATTTN
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGGGGATTTG--
NGGGGATTTCCC
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGGGGATTTG----
TTAAGGGGATTAACTAC
 A C G T A C G T A C G T T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTTG
-NGGGATTA-
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGGGGATTTG-
--GGGATTANN
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGGGGATTTG-
-VRGGATTARN
 T G C A A T C G C T A G A T C G A C T G G T C A A C G T A G C T A C G T C A T G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C