Information for 6-GCGGACGGCA (Motif 10)

A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
Reverse Opposite:
G A C T A C T G A T G C T G A C A C T G A C G T A G T C T G A C T C A G A G T C
p-value:1e-9
log p-value:-2.113e+01
Information Content per bp:1.826
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif382.5
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets54.9 +/- 27.5bp
Average Position of motif in Background50.2 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACGGCA
NCGCGGACGTTG
 A C G T A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

CREB1/MA0018.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGGACGGCA
--TGACGTCA
 A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGACGGCA-
CGGTGACGTCAC
 A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACGGCA----
NCGATGACGTCATCGN
 A C G T A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A A C G T A C G T A C G T A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGGACGGCA-
TTTGCACACGGCAC
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCGGACGGCA
----ACGTCA
 A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGGACGGCA
CCAGACRSVB
 A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGACGGCA-
NGATGACGTCAT
 A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A A C G T
A G C T C T A G T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCGGACGGCA
AAAATGCTGACT---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGACGGCA----
CCGATGACGTCATCGT
 A C G T A C G T A C T G A G T C A C T G A C T G G T C A G T A C A C T G T A C G G T A C C T G A A C G T A C G T A C G T A C G T
A T G C A T G C A C T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T G T A C T C A G G A C T