Information for 6-AAAGGCGCCGCCT (Motif 6)

G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T
Reverse Opposite:
T G C A A C T G A C T G A T G C C A T G A C T G A G T C A C T G G A T C A G T C A C G T A G C T C A G T
p-value:1e-14
log p-value:-3.356e+01
Information Content per bp:1.778
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif24.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets47.2 +/- 18.9bp
Average Position of motif in Background57.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AAAGGCGCCGCCT--
---GGCCCCGCCCCC
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAGGCGCCGCCT---
--NAGCCCCGCCCCCN
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAAGGCGCCGCCT---
----GCTCCGCCCMCY
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCGCCGCCT-
CAAAGGCGTGGCCAG
 A C G T G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAAGGCGCCGCCT------
----GCCCCGCCCCCTCCC
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGCGCCGCCT-
NNNGGGGCGCCCCCNN
 A C G T A C G T G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCGCCGCCT------
CNNBRGCGCCCCCTGSTGGC
 A C G T G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AAAGGCGCCGCCT--
----GCCCCGCCCCC
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAAGGCGCCGCCT----
-NNGGCGACACCTCNNN
 G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAGGCGCCGCCT
ATAAGGGCGCGCGAT
 A C G T A C G T G C T A C T G A T C G A C T A G C A T G G T A C C T A G A G T C G A T C A T C G A G T C A G T C A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T