Information for 3-CTTCTCTBTAABTCTG (Motif 3)

A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C T G A T G A C A G C T A G C T C G T A T G A C C G T A C T A G G T C A A T C G C G T A C G T A C T A G
p-value:1e-15
log p-value:-3.536e+01
Information Content per bp:1.726
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 30.5bp
Average Position of motif in Background50.7 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTCTCTBTAABTCTG
CTTATCTCHMCATCT-
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G
A T G C G A C T C G A T C G T A A C G T A G T C C G A T A G T C G A T C G T C A T A G C C G T A A C G T A G T C C G A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.55
Offset:10
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG----
----------GGTCTGGCAT
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:CTTCTCTBTAABTCTG-
---------NNNANTGA
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG-
-------VBSYGTCTGG
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

POU4F2/MA0683.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CTTCTCTBTAABTCTG---
---CTCATTAATTATGCAT
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.51
Offset:12
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG--
------------GCTGTG
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG-
---------CTGTCTGG
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.50
Offset:9
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG-
---------TWGTCTGV
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CTTCTCTBTAABTCTG------
-----NNTNNTGTCTGGNNTNG
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.48
Offset:8
Orientation:forward strand
Alignment:CTTCTCTBTAABTCTG
--------TAATCCCN
 A G T C C G A T G C A T A T G C A C G T A G T C C G A T A C T G G C A T C T G A T C G A A C T G A G C T A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G