Information for 12-TCAAATGGGC (Motif 19)

A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
Reverse Opposite:
A C T G A G T C G T A C A G T C C G T A A C G T A C G T A C G T A C T G C G T A
p-value:1e-7
log p-value:-1.707e+01
Information Content per bp:1.918
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.8 +/- 29.4bp
Average Position of motif in Background52.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATGGGC
NTCAAGTGGN-
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCAAATGGGC
NTCAAGTGG--
 A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCAAATGGGC--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAAATGGGC
ACATCAAAGG---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCAAATGGGC
NATTCAAAT----
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCAAATGGGC
ACWTCAAAGG---
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCAAATGGGC--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TCAAATGGGC-
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TCAAATGGGC--
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCAAATGGGC
ACATATGG--
 A C G T A G T C C G T A C G T A C G T A A C G T A C T G A C T G C T A G G T A C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T