Information for 9-CCGMGGCTCTTTARAG (Motif 16)

A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
Reverse Opposite:
A G T C C G A T A G C T A C G T G T C A G C T A C G T A C T A G C G T A A C T G A T G C A G T C A C T G G T A C A C T G T A C G
p-value:1e-7
log p-value:-1.823e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 23.4bp
Average Position of motif in Background71.0 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2B/MA0660.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG-
-----GCTATTTATAGC
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG
----GNCTATAAAAGG
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG-
-----TCTATTTATAGN
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG
-NNNNNNCTTTTATAN
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG
-NNNNNNCTTTTATAN
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
A C G T A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG
----NSCACTYVAV--
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CCGMGGCTCTTTARAG
----RSCACTYRAG--
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCGMGGCTCTTTARAG-
-----TCTATTTTTAGA
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCGMGGCTCTTTARAG-
-----GCTATTTTTGGM
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CCGMGGCTCTTTARAG--
-ATAACCACTTGAAAATT
 A T G C A G T C A C T G G T A C C T A G A T C G A G T C A C G T A G T C A C G T C G A T A C G T C G T A C T G A C G T A A C T G A C G T A C G T
A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T