Information for 4-AGCCAATCGC (Motif 14)

G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
Reverse Opposite:
A T C G T A G C T C A G T C G A C A G T A G C T A C T G A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.748
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.83%
Number of Background Sequences with motif235.4
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets51.1 +/- 24.6bp
Average Position of motif in Background48.1 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGCCAATCGC
AGCCAATCGG
 G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCGC
ACTAGCCAATCA-
 A C G T A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGCCAATCGC
CAGCC------
 A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCCAATCGC
TGCCAA----
 G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCGC
CGTGCCAAG---
 A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATCGC
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

POL001.1_MTE/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGCCAATCGC----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAATCGC
BCAGACWA----
 A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCGC
GGTGCCAAGT--
 A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCCAATCGC
GTCAGCANNTN--
 A C G T A C G T A C G T G T C A A C T G A G T C G T A C T C G A G T C A A C G T A G T C A T C G T A G C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T