Information for 2-CACGCAGGCCCTT (Motif 6)

A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
Reverse Opposite:
C T G A C G T A A C T G A C T G A C T G A G T C A G T C C G A T A C T G A G T C A T C G A C G T A C T G
p-value:1e-12
log p-value:-2.863e+01
Information Content per bp:1.857
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.3 +/- 7.9bp
Average Position of motif in Background38.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACGCAGGCCCTT
CACGCA-------
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACGCAGGCCCTT--
ANCGCGCGCCCTTNN
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CACGCAGGCCCTT---
TCACCCCGCCCCAAATT
 A C G T A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACGCAGGCCCTT--
NTCGCGCGCCTTNNN
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CACGCAGGCCCTT
TBGCACGCAA------
 A C G T A C G T A C G T A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACGCAGGCCCTT
TCCCAGMCRAGCCCC-
 A C G T A C G T A C G T A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CACGCAGGCCCTT
---CTAGGCCT--
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CACGCAGGCCCTT
AGCAACAGCCGCACC---
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CACGCAGGCCCTT-
------GGCVGTTR
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CACGCAGGCCCTT
---CNAGGCCT--
 A G T C C G T A A T G C C T A G A G T C C G T A A C T G A C T G A G T C A G T C G T A C A C G T A G C T
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T