Information for 13-CTGACCTGAC (Motif 17)

A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.880e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.25%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 34.3bp
Average Position of motif in Background50.3 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGAC
-TGACCTYA-
 A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGAC
-TGACCT---
 A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTGACCTGAC
CCTCACCTG--
 A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGAC
NNACTTACCTN--
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGAC---
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGACCTGAC
GTGACCTT--
 A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGACCTGAC
CGGTGACGTCAC
 A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACCTGAC
-TGACCYCT-
 A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCTGAC---
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCTGAC---
GATGACGTGGCANT
 A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T