Information for 6-CGTTCTTTGT (Motif 11)

A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T
Reverse Opposite:
C G T A T A G C C G T A C G T A C T G A A T C G C G T A C T G A A T G C C T A G
p-value:1e-11
log p-value:-2.680e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif57.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets54.2 +/- 25.8bp
Average Position of motif in Background61.3 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:forward strand
Alignment:CGTTCTTTGT
----CTTTGT
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGTTCTTTGT------
TNNTCCTTTGTTCTNNT
 A C G T A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGTTCTTTGT------
NNNTCCTTTGTTCTNNN
 A C G T A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGTTCTTTGT---
---CCWTTGTYYB
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGTTCTTTGT---
---YCTTTGTTCC
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGTTCTTTGT
AGGVNCCTTTGT
 A C G T A C G T A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGTTCTTTGT------
ANTCCTTTGTCTNNNN
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGTTCTTTGT---
---CCTTTGTTTT
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGTTCTTTGT-
---CCWTTGTY
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGTTCTTTGT---
---CCATTGTTTT
 A G T C T A C G A G C T A C G T A T G C G A C T C G A T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T