Information for 7-AATCCTTATAAAA (Motif 8)

C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
Reverse Opposite:
A G C T A C G T A C G T A C G T C G T A C G A T C G T A C G T A A C T G C T A G C T G A A C G T A C G T
p-value:1e-13
log p-value:-3.124e+01
Information Content per bp:1.843
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.6 +/- 22.2bp
Average Position of motif in Background52.4 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AATCCTTATAAAA
---CCYMATAAAA
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AATCCTTATAAAA
NNNATTAATCCGNTTNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AATCCTTATAAAA
NNNATTAATCCGNTTNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AATCCTTATAAAA
---NCYAATAAAA
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AATCCTTATAAAA--
---CCTTTTATAGNC
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0068.1_Hoxc13/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATCCTTATAAAA---
AAAGCTCGTAAAATTT
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AATCCTTATAAAA-
----CCAATAAAAA
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AATCCTTATAAAA
NYTAATCCYB------
 A C G T A C G T A C G T C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATCCTTATAAAA----
-AACCCAATAAAATTCG
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AATCCTTATAAAA----
-CTACCAATAAAATTCT
 C G T A C G T A A G C T A G T C A G T C A C G T C G A T C G T A C G A T G T C A C G T A C G T A C T G A A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T