Information for 5-GCAGTATTACAVG (Motif 6)

C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C G T T G C A G T C A C G A T C G T A T G A C C G A T A T C G A G T C
p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.800
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 28.4bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG------
--ANTATTACATGTANNNN
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG------
--NNTTTTACATGTANNNT
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCAGTATTACAVG
-----TTGACAGG
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG------
--NNTATTACATGTANNNT
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCAGTATTACAVG
-----TTGACAG-
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG------
--ANTTNTACATGTANTTN
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCAGTATTACAVG
-----TTGACAGC
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG------
--ANTNNTACATGTANNTN
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGTATTACAVG---
-CCGTATTATAAACAA
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T
A C G T G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAGTATTACAVG-----
--GTATTGACAGGTNNTT
 C T A G A T G C C G T A A C T G C G A T C G T A A C G T A C G T C G T A A G T C C G T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T