Information for 2-TTYCARAGRBYTSTGG (Motif 5)

A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
Reverse Opposite:
G A T C A G T C C G T A T A G C G C T A C T A G T A G C A G T C G T A C C G A T G A T C C G A T A C T G C T A G C G T A C G T A
p-value:1e-14
log p-value:-3.252e+01
Information Content per bp:1.603
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.22%
Number of Background Sequences with motif193.4
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets45.0 +/- 23.0bp
Average Position of motif in Background50.0 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTYCARAGRBYTSTGG---
NTTMRCACNNNVSTGYKAANT
 A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G A C G T A C G T A C G T
G C A T A G C T G A C T T G C A C T G A T A G C C T G A A T G C G A T C A G C T T G C A T C A G A T C G G A C T T A C G G A C T A C T G C T G A C T G A G C T A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTYCARAGRBYTSTGG
TTTTCCA-----------
 A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTYCARAGRBYTSTGG
ATGCCAGACN-------
 A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTYCARAGRBYTSTGG
ATTTTCCATT---------
 A C G T A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TTYCARAGRBYTSTGG
TGGTTTCAGT---------
 A C G T A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTYCARAGRBYTSTGG
GCATTCCAGN---------
 A C G T A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---TTYCARAGRBYTSTGG
ATTTTCCATT---------
 A C G T A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TTYCARAGRBYTSTGG
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TTYCARAGRBYTSTGG
ATTTTCCATT---------
 A C G T A C G T A C G T A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTYCARAGRBYTSTGG
TGTCANYT--------
 A C G T G C A T G A T C A G T C C G T A C T A G C G T A C A T G C T A G A T C G G A T C C G A T A T C G C G A T T C A G C T A G
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T