Information for 10-TTAWTGTKGTMAA (Motif 13)

A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A G T C G T A C C G T A A G T C C G T A C G T A A C G T C G T A C G T A
p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.1 +/- 19.3bp
Average Position of motif in Background56.2 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTAWTGTKGTMAA-
TAATTGTTCTAAAC
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA----
-TAAAGTCGTAAAATAG
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTAWTGTKGTMAA-
TTCAATTGTTCTAAAA
 A C G T A C G T A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA----
-TAAAGTCGTAAAACAT
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA----
-TAAAGTCGTAAAACGT
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTAWTGTKGTMAA
NNTTTATTGTTCTNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA-----
-TAAGGTCGTAAAATCCT
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTAWTGTKGTMAA
AANTTATTGTTCTNNA
 A C G T A C G T A C G T A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA-----
-CAAGGTCGTAAAATCTT
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTAWTGTKGTMAA-----
-TTAGGTCGTAAAATTTC
 A C G T A C G T C G T A G C A T A C G T C T A G A C G T C A G T A C T G A C G T G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C