Information for 3-ATGGGBCACTTTGGHD (Motif 10)

C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
Reverse Opposite:
G A C T C A T G T A G C A G T C G T C A G T C A G T C A T A C G A C G T A C T G T A G C A G T C A G T C G T A C C G T A A G C T
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.781
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 24.8bp
Average Position of motif in Background39.5 +/- 12.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD
GTAGGTCACTGGGTCA
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD-
--AGGTCACCCTGACCT
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A A C G T
A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD
-NAGGTCACNNTGACC
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD
--AGGTCA--------
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD----
GTAGGTCACGGTGACCTACT
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATGGGBCACTTTGGHD
CGCGCCGGGTCACGTA----
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGGGBCACTTTGGHD
AAYTAGGTCA--------
 A C G T A C G T C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGBCACTTTGGHD
NATGAGTCACN------
 A C G T C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGGGBCACTTTGGHD
AGRGGTCA--------
 C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ATGGGBCACTTTGGHD
NNNNTTGGGCACNNCN---
 A C G T A C G T A C G T C T G A A C G T A C T G A C T G A C T G A C T G A G T C C G T A A T G C A C G T A C G T A C G T A C T G A T C G G A T C C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T A C G T A C G T