Information for 2-CCACAAAGCAAAAGGA (Motif 3)

A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G C T C G A T A C T G A C G T A C T G A C T G
p-value:1e-16
log p-value:-3.721e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.9 +/- 19.7bp
Average Position of motif in Background32.4 +/- 10.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCACAAAGCAAAAGGA
--ACAAAG--------
 A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAGCAAAAGGA
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAAGCAAAAGGA
AAACCACAGAN--------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCACAAAGCAAAAGGA
VRRACAAWGG-------
 A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAGCAAAAGGA
TACCCACAATGCATTG---
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCACAAAGCAAAAGGA
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAGCAAAAGGA
AAACCGCAAA---------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCACAAAGCAAAAGGA
AAACCACANN---------
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCACAAAGCAAAAGGA
---GAAASYGAAASY-
 A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCACAAAGCAAAAGGA
GGCCATAAATCA------
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A C T G A G T C A T A C G A G T C C G T A G T C A C G T A G T C A C T A G A T C G C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T