Information for 9-GTVTCCACTA (Motif 14)

A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A C T A G A C G T A C T G A C T G C G T A A G T C G T C A A G T C
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif24.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets30.6 +/- 21.3bp
Average Position of motif in Background52.2 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTVTCCACTA
--ATCCAC--
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTVTCCACTA------
NTCNTCCCCTATNNGNN
 A C G T A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTVTCCACTA
ATTTTCCATT-
 A C G T A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTVTCCACTA--
----YCATTAMC
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GTVTCCACTA--
--MRSCACTYAA
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTVTCCACTA-
SSAATCCACANN
 A C G T A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTVTCCACTA---
---ACCACTTGAA
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTVTCCACTA---
----CCACTTGAA
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTVTCCACTA--
--AASCACTCAA
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTVTCCACTA---
---NSCACTYVAV
 A C T G A C G T T C A G A C G T G T A C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G