Information for 6-GTGBCTACAATATBAC (Motif 13)

A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
Reverse Opposite:
C T A G A C G T T C G A C T G A G C A T T C G A A G C T A C G T A C T G A C G T C T G A A C T G T A G C A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 20.2bp
Average Position of motif in Background26.9 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTGBCTACAATATBAC
NWAACCACADNN----
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GTGBCTACAATATBAC
-----GACAATGNN--
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTGBCTACAATATBAC
NNTNANAACAATTNNA-
 A C G T A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTGBCTACAATATBAC
-TWGHWACAWTGTWDC
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGBCTACAATATBAC
NAAACCACAG------
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GTGBCTACAATATBAC
-----AACAAT-----
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGBCTACAATATBAC
-YDGHTACAWTGTADC
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GTGBCTACAATATBAC
-AAACCACAGAN----
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GTGBCTACAATATBAC
-AAACCACAGC-----
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTGBCTACAATATBAC
---ACTACAATTCCC-
 A C T G A C G T C T A G A C T G A G T C A G C T C G T A A G T C C G T A C T G A A G C T C G T A A G C T A C G T T G C A A G T C
A C G T A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T