Information for 5-CCGCGTGACGAGTGGG (Motif 20)

A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G T C C G A T A G T C A C T G A C G T A G T C C T G A A G T C C T A G A G T C A C T G C T A G
p-value:1e-3
log p-value:-8.684e+00
Information Content per bp:1.907
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 2.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCGCGTGACGAGTGGG-----
-----TGCGGAGTGGGACTGG
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGCGTGACGAGTGGG
NCACGTGACN------
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCGCGTGACGAGTGGG
NNGTCGCGTGNCAC-----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCGCGTGACGAGTGGG
--NCGTGACN------
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGCGTGACGAGTGGG
RTCATGTGAC-------
 A C G T A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGCGTGACGAGTGGG
NCACGTGACN------
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGCGTGACGAGTGGG
TCACGTGACCGG----
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCGCGTGACGAGTGGG
ATCACGTGAC-------
 A C G T A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCGCGTGACGAGTGGG
-TGCGTG---------
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCGCGTGACGAGTGGG-----
----GTATTGGGTGGGTAATT
 A G T C A G T C A C T G A G T C A C T G A G C T C T A G C G T A A G T C A C T G C G T A A C T G A C G T A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T