Information for 5-TTGCCAGTATCTGTGC (Motif 9)

G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
Reverse Opposite:
T C A G A T G C C G T A G T A C G T C A C T A G T G C A A G C T T C G A A T G C A C G T A T C G A C T G A T G C G T C A C T G A
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.659
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.81%
Number of Background Sequences with motif185.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets51.5 +/- 26.2bp
Average Position of motif in Background53.4 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGCCAGTATCTGTGC
NNNNTGCCAGTGATTG---
 A C G T A C G T A C G T G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGCCAGTATCTGTGC
CTTGGCAA---------
 A C G T G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAGTATCTGTGC
ATTTACAGTAGCAAAA-
 A C G T G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAGTATCTGTGC
ATGTACAGTAGCAAAG-
 A C G T G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TTGCCAGTATCTGTGC
-TGGCAGTTGN-----
 G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTGCCAGTATCTGTGC
-TGCCAA---------
 G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTGCCAGTATCTGTGC
CTGCCCGCA-------
 G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTGCCAGTATCTGTGC
CGTGCCAAG--------
 A C G T G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.50
Offset:9
Orientation:forward strand
Alignment:TTGCCAGTATCTGTGC
---------GCTGTG-
 G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTGCCAGTATCTGTGC
TGCCCAGNHW------
 G A C T C A G T A T C G A G T C A T G C T C G A A T C G A G C T C T G A A C G T A G T C C A G T A C T G G A C T A T C G A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T