Information for 1-AGCCTGCCGT (Motif 8)

C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T
Reverse Opposite:
G C T A A G T C T A C G C A T G A T G C C G T A A C T G C T A G A G T C A C G T
p-value:1e-10
log p-value:-2.444e+01
Information Content per bp:1.843
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif119.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets48.7 +/- 22.4bp
Average Position of motif in Background53.5 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGCCGT-
CCCCCTGCTGTG
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGCCGT----
NNTCCTGCTGTGNNN
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCCGT
TWGTCTGV---
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCTGCCGT
CAGCC------
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGCCTGCCGT--
--CCTGCTGAGH
 C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGCCGT----
TNTCCTGCTGTGNNG
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGCCTGCCGT
----TGACGT
 C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCCTGCCGT--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCCTGCCGT-
TGCCTGAGGCN
 C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTGCCGT----
TCNCCTGCTGNGNNN
 A C G T C G T A A C T G A G T C A G T C A C G T A T C G G T A C A G T C C T A G C G A T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G