Information for 4-CYAYCTTCATGTC (Motif 5)

A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A A G T C C G T A A C G T A C T G C G T A C G T A A C T G C T A G A C G T C T G A A C T G
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.921
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 29.2bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CYAYCTTCATGTC---
--ACATTCATGACACG
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CYAYCTTCATGTC
---ACTTCCTGTT
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CYAYCTTCATGTC--
GACCACATTCATACAAT
 A C G T A C G T A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CYAYCTTCATGTC
--CACTTCCTGT-
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CYAYCTTCATGTC-----
-AATATACATGTAAAATT
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CYAYCTTCATGTC-
--ACTTTCGTTTCT
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CYAYCTTCATGTC-----
-AAAATACATGTAAAAAT
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CYAYCTTCATGTC
----CTTCCGGT-
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CYAYCTTCATGTC-----
-AATATACATGTAATATA
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CYAYCTTCATGTC-----
-TAAATACATGTAAAATT
 A G T C A G C T G T C A A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T