Information for 18-ACGGCGTGAA (Motif 42)

C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C C T G A A G T C A C T G A G T C A G T C A C T G A C G T
p-value:1e-4
log p-value:-9.873e+00
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.8 +/- 25.6bp
Average Position of motif in Background45.1 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACGGCGTGAA
CWGGCGGGAA
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACGGCGTGAA---
-TGGCGGGAAAHB
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ACGGCGTGAA--
--GGCGGGAARN
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACGGCGTGAA--
-GGGCGGGAAGG
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ACGGCGTGAA--
--GGCGGGAAAH
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ACGGCGTGAA-
BTKGGCGGGAAA
 A C G T C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACGGCGTGAA----
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACGGCGTGAA
AAGGTGTGAA
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACGGCGTGAA
ATGGGGTGAT
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACGGCGTGAA
--TGCGTG--
 C G T A A G T C A C T G A C T G A G T C A C T G A G C T A C T G C G T A C T G A
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T