Information for 17-AGGGCCAGACGGG (Motif 31)

C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A G C T A G T C A C G T A C T G A C T G A G T C A G T C A G T C A C G T
p-value:1e-6
log p-value:-1.466e+01
Information Content per bp:1.925
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.5 +/- 22.6bp
Average Position of motif in Background67.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGGGCCAGACGGG
----CCAGACAG-
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AGGGCCAGACGGG-
----CCAGACRSVB
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCAGACGGG
AGGTGHCAGACA--
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGCCAGACGGG---
CAAATCCAGACATCACA
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCAGACGGG
CAGGCCNNGGCCNN
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCCAGACGGG
AGGTGNCAGACAG-
 A C G T C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGGCCAGACGGG
-ATGCCAGACN--
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGGCCAGACGGG-
GGGGCCCAAGGGGG
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGGCCAGACGGG
CGTGCCAAG----
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGGGCCAGACGGG
----BCAGACWA-
 C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G C T G A A G T C C T A G C T A G A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T