p-value: | 1e-7 |
log p-value: | -1.706e+01 |
Information Content per bp: | 1.717 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.95% |
Number of Background Sequences with motif | 319.0 |
Percentage of Background Sequences with motif | 0.65% |
Average Position of motif in Targets | 52.6 +/- 23.8bp |
Average Position of motif in Background | 47.8 +/- 30.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0207.1_Zic3_2/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCTSTCCKT NNTCCTGCTGTGNNN |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCTSTCCKT TNTCCTGCTGTGNNG |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCTSTCCKT TCNCCTGCTGNGNNN |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TCTTGCTSTCCKT ---NGCTN----- |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTTGCTSTCCKT CCCCCTGCTGTG--- |
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SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCTTGCTSTCCKT ACATCCTGNT------ |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 7 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TCTTGCTSTCCKT GGCCYCCTGCTGDGH-- |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCTTGCTSTCCKT ----GCTGTG--- |
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NRL/MA0842.1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCTTGCTSTCCKT AATTTGCTGAC--- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TCTTGCTSTCCKT ----GCTGTCAA- |
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