Information for 6-GGATCTTGCA (Motif 24)

A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G T G A C C T G A C G T A A C T G G C T A A C G T A G T C A G T C
p-value:1e-8
log p-value:-1.887e+01
Information Content per bp:1.857
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif89.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets40.2 +/- 25.1bp
Average Position of motif in Background50.7 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTTGCA
NGGATTAN---
 A C G T A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGATCTTGCA-
-GGTCTGGCAT
 A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GGATCTTGCA
ANCAGGATGT----
 A C G T A C G T A C G T A C G T A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGATCTTGCA--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGATCTTGCA
NRRGGGTCTT---
 A C G T A C G T A C G T A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGATCTTGCA---
-GGGATTGCATNN
 A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGATCTTGCA--
GGCTCYAKCAYC
 A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGATCTTGCA-
-NATGTTGCAA
 A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTTGCA
CGGAGC-----
 A C G T A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGATCTTGCA-----
GGNTCTCGCGAGAAC
 A C T G A C T G G T C A C G A T A G T C A C G T G A C T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C