Information for 12-CTGTCTGAGCCTGGAG (Motif 19)

A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C A T G C C T G A A C T G A T C G A G T C C G A T A G T C C G T A A C T G C G T A A T G C C G T A A C T G
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.840
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 29.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGAGCCTGGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGTCTGAGCCTGGAG
CTGTCTGG--------
 A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTGAGCCTGGAG
NNTNNTGTCTGGNNTNG---
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTGAGCCTGGAG
VBSYGTCTGG--------
 A C G T A C G T A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTGAGCCTGGAG
GCTGTCAA---------
 A C G T A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CTGTCTGAGCCTGGAG
NTGTCAN---------
 A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTGTCTGAGCCTGGAG--
------GRTGMTRGAGCC
 A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTGTCTGAGCCTGGAG
-WDNCTGGGCA-----
 A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CTGTCTGAGCCTGGAG
TWGTCTGV--------
 A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTGAGCCTGGAG
GCTGTG-----------
 A C G T A G T C A C G T A T C G A C G T A G T C C G A T A C T G C G T A C T A G A T G C G T A C A G C T A T C G A C T G C G T A A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T