Information for 10-GCTCAGGGWTCAGGTG (Motif 17)

A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
Reverse Opposite:
A G T C G C T A A T G C A G T C A C G T A T C G C G T A C G A T A G T C G T A C G T A C A C G T A C T G C T G A A C T G A T G C
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.799
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 7.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTCAGGGWTCAGGTG-
GGCGAGGGGTCAAGGGC
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCTCAGGGWTCAGGTG
-----NGGATTAN---
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCTCAGGGWTCAGGTG
GAGGTCAAAGGTCA----
 A C G T A C G T A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCTCAGGGWTCAGGTG
---CAAAGGTCAG---
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCTCAGGGWTCAGGTG-
CTCCAGGGGTCAATTGA
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAGGGWTCAGGTG
TGCCCAGNHW-------
 A C G T A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCTCAGGGWTCAGGTG
AGGGGTCAGAGGTCA----
 A C G T A C G T A C G T A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCTCAGGGWTCAGGTG
----AGRGGTCA----
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCTCAGGGWTCAGGTG
---CAAAGGTCAAGGG
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G
A C G T A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTCAGGGWTCAGGTG-
NTNNNGGGGTCANGNNN
 A T C G A G T C A G C T A G T C C G T A A C T G A C T G A C T G C G T A A C G T A T G C C G T A A C T G A T C G C G A T T C A G A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A