Information for 9-GGGACTTCACGGA (Motif 15)

A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A C G T A T C G C G T A C G T A A C T G A C G T A G T C A G T C A G T C
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 17.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGACTTCACGGA
GTGACGTCACCG-
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGACTTCACGGA
NGGGGATTTCCC---
 A C G T A C G T A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGACTTCACGGA-
----CTTCCNGGAA
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGGACTTCACGGA---
--NNCTTCCNGGAAGN
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGACTTCACGGA
GGGGATTTCC---
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGACTTCACGGA
GGGAATTTCC---
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGGACTTCACGGA--
---NTTTCCNGGAAA
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGGACTTCACGGA---
--NATTTCCNGGAAAT
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGACTTCACGGA
GGGAATTTCC---
 A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGGACTTCACGGA
GGGGGAATCCCC---
 A C G T A C G T A C T G A C T G A C T G C G T A A G T C C G A T C G A T A T G C G T C A A G T C A C T G A C T G C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T