Information for 1-GCCGCCGCGGGTTTTT (Motif 1)

C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
Reverse Opposite:
C T G A C T G A C G T A C G T A C G T A T A G C A G T C G A T C C A T G A G T C A T C G C A T G G T A C A C T G A C T G G A T C
p-value:1e-16
log p-value:-3.856e+01
Information Content per bp:1.799
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 27.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)2.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GCCGCCGCGGGTTTTT-------
------GNATTTTTTTTTTGANC
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:GCCGCCGCGGGTTTTT-------
------NNNNTTTTTTTTTNAAC
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:GCCGCCGCGGGTTTTT-------
---------TTTTTTTTCNNGTN
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GCCGCCGCGGGTTTTT
TGCCCTGAGGGCA----
 A C G T C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCGCGGGTTTTT
TGCCCTNAGGGCA----
 A C G T C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.46
Offset:9
Orientation:reverse strand
Alignment:GCCGCCGCGGGTTTTT-------
---------NNTTTTTCTTATNT
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCCGCCGCGGGTTTTT
TGCCCTNAGGGCA----
 A C G T C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.46
Offset:-2
Orientation:reverse strand
Alignment:--GCCGCCGCGGGTTTTT
NCGCAGCGGGGGGTC---
 A C G T A C G T C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.45
Offset:9
Orientation:forward strand
Alignment:GCCGCCGCGGGTTTTT
---------GTTTGTT
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.44
Offset:8
Orientation:reverse strand
Alignment:GCCGCCGCGGGTTTTT----
--------DGWTTTATGRCN
 C T A G A G T C A G T C A C T G G A T C A T G C T C A G G A T C C T A G A C T G A T C G A C G T A C G T C G A T A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C