Information for 4-AAAACACAMA (Motif 11)

C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
Reverse Opposite:
A C G T A C T G C G A T A C T G A C G T C A T G A C G T A C G T A C G T A G C T
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.699
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif726.4
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets50.9 +/- 24.2bp
Average Position of motif in Background49.7 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAAACACAMA---
GTTAAAAAAAAAAATTA
 A C G T A C G T A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------AAAACACAMA
CAAAAGTAAACAAAG-
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAACACAMA
AAACCACANN
 C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AAAACACAMA-
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------AAAACACAMA-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAAACACAMA-
AAACCACAGAN
 C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAACACAMA
NANANAC---
 C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAACACAMA
AAACCACAGC
 C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAACACAMA--
GCAAAACATTACTA
 A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AAAACACAMA
TACTGGAAAAAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A G T C A G T C A G T A C G T C A T G A C C G T A T G A C G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T