Information for 12-CCTGCTGGTACAG (Motif 22)

A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G C T G T C A A G T C A G T C C G T A A C T G A G T C C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.686e+01
Information Content per bp:1.940
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.8 +/- 18.6bp
Average Position of motif in Background57.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGTACAG
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGCTGGTACAG
CCTGCTGAGH---
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTGGTACAG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGTACAG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGTACAG
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGTACAG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTGCTGGTACAG
CATGCGGGTAC--
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCTGCTGGTACAG
---CCAGGAACAG
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTGCTGGTACAG
CCAGCTGTTN---
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTGCTGGTACAG-
--TGCTGASTCAGC
 A G T C A G T C A C G T A C T G A G T C A C G T A C T G A C T G A C G T C T G A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C