Information for 5-TGCAGCATGTTACAGS (Motif 6)

A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
Reverse Opposite:
A T C G T G A C C G A T A C T G A C G T G C T A C T G A A G T C C G T A G C A T A C T G A T G C C G A T A C T G A G T C T C G A
p-value:1e-12
log p-value:-2.971e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.25%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.2 +/- 28.2bp
Average Position of motif in Background36.3 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCATGTTACAGS
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCATGTTACAGS
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCAGCATGTTACAGS
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGCATGTTACAGS
DCTCAGCAGG-------
 A C G T A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCAGCATGTTACAGS
---RTCATGTGAC---
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCAGCATGTTACAGS
---GTCATGTGACC--
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCAGCATGTTACAGS
-GTGCCACGCGACTG-
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGS
-----NTTGATACATT
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGCAGCATGTTACAGS
---GCCACGTGACC--
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TGCAGCATGTTACAGS
---ACCACGTGAC---
 A C G T T C A G A G T C C G T A A T C G A G T C C G T A G A C T A C T G A G C T C A G T G T C A A G T C C G T A A C T G T A G C
A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T