Information for 4-CCACAYTGTGTGCAYG (Motif 5)

A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
Reverse Opposite:
G A T C T C G A G A C T A C T G A T G C T C G A A T G C C T G A A T G C G T C A C T G A C A G T T C A G A C G T C A T G T A C G
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.605
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif377.7
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets52.8 +/- 27.1bp
Average Position of motif in Background50.5 +/- 49.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCACAYTGTGTGCAYG----
---NTNTATGTGCACATNNN
 A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCACAYTGTGTGCAYG
VAGRACAKWCTGTYC---
 A C G T A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCACAYTGTGTGCAYG
AGNACANNNTGTNCTN-
 A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCACAYTGTGTGCAYG
AGNACAGNCTGTTCTN-
 A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCACAYTGTGTGCAYG-
--CCATTGTATGCAAAT
 A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCACAYTGTGTGCAYG
GVACAGNMTGTYCTB-
 A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACAYTGTGTGCAYG
AAGAACATWHTGTTC---
 A C G T A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CCACAYTGTGTGCAYG----
---NNGTATGTGCACATNNN
 A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCACAYTGTGTGCAYG
GGGAACACGGTGTACCC-
 A C G T A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCACAYTGTGTGCAYG
GGGAACATTGTGTTCCC-
 A C G T A C G T A T G C G T A C T G C A A G T C G C T A A G C T C A G T T A C G G A C T T A C G A G C T T A C G G T A C C G T A A G C T C T A G
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C A C G T