Information for 2-TCCCAGCAWTGCTTGT (Motif 3)

A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
Reverse Opposite:
C T G A A G T C C G T A G T C A C T A G A G T C G T C A C G A T A C G T A C T G A G T C C G A T A C T G A C T G T A C G C T G A
p-value:1e-13
log p-value:-3.160e+01
Information Content per bp:1.780
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 25.2bp
Average Position of motif in Background44.7 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCCCAGCAWTGCTTGT--
--GCAGCCAAGCGTGACN
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T A C G T A C G T
A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCCCAGCAWTGCTTGT-
--SCAGYCADGCATGAC
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCCAGCAWTGCTTGT
TCCCAGMCRAGCCCC-
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TCCCAGCAWTGCTTGT
--CCWGGAATGY----
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:TCCCAGCAWTGCTTGT--
--------TTGCGTGCVA
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCCCAGCAWTGCTTGT
---------TGCGTG-
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGCAWTGCTTGT
TGCCCAGNHW-------
 A C G T A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TCCCAGCAWTGCTTGT-
------TATTGTTTATT
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGCAWTGCTTGT
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:TCCCAGCAWTGCTTGT
-----GCAGTGATTT-
 A G C T A T G C A G T C G T A C C G T A C T A G A G T C G T C A C G T A A C G T A C T G A G T C C A G T A C G T C T A G A G C T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T