Information for 13-ACACATAGCACACAGG (Motif 20)

C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T A C T G A G C T A C T G A T G C A G C T G T C A A G C T A C T G A C G T A C T G C G A T
p-value:1e-8
log p-value:-2.017e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.6 +/- 13.2bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACACATAGCACACAGG---
---CGAAGCACACAAAATA
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACACATAGCACACAGG---
---AGCGGCACACACGCAA
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.55
Offset:10
Orientation:reverse strand
Alignment:ACACATAGCACACAGG
----------CACAGN
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACACATAGCACACAGG
NNNVCTGWGYAAACASN
 A C G T C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:ACACATAGCACACAGG
------AAAACAAAGG
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:ACACATAGCACACAGG
--------AACAAAGG
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:ACACATAGCACACAGG
------GGAACAAAGR
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.48
Offset:5
Orientation:forward strand
Alignment:ACACATAGCACACAGG---
-----TAGGGCAAAGGTCA
 C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:reverse strand
Alignment:--ACACATAGCACACAGG
AAGCACATGG--------
 A C G T A C G T C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.47
Offset:-1
Orientation:reverse strand
Alignment:-ACACATAGCACACAGG
NACATATGGN-------
 A C G T C G T A A G T C C G T A A G T C C T G A A C G T C T G A A T C G G T A C C T G A A G T C G T C A A G T C C G T A A C T G A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T