p-value: | 1e-13 |
log p-value: | -3.160e+01 |
Information Content per bp: | 1.818 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.94% |
Number of Background Sequences with motif | 1.6 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 41.8 +/- 27.1bp |
Average Position of motif in Background | 21.0 +/- 16.9bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0170.1_Sox17_2/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CACCTCATGCATG---- GACCACATTCATACAAT |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 2 |
Score: | 0.58 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | CACCTCATGCATG----- ----ACATTCATGACACG |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | CACCTCATGCATG -----CACGCA-- |
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SREBF2/MA0596.1/Jaspar
Match Rank: | 4 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CACCTCATGCATG ATCACCCCAT----- |
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SREBF1/MA0595.1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CACCTCATGCATG ATCACCCCAC----- |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CACCTCATGCATG --TBGCACGCAA- |
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SCRT2/MA0744.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CACCTCATGCATG CCACCTGTTGCAT- |
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Pax6/MA0069.1/Jaspar
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CACCTCATGCATG-- -AANTCATGCGTGAA |
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PAX1/MA0779.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CACCTCATGCATG------ --CGTCACGCATGACTGCA |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 10 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CACCTCATGCATG --GHATATKCAT- |
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