Information for 5-GACTCACGGTGTC (Motif 17)

A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C T G A A T G C G T A C C T A G A C G T A C T G G T C A C T A G A G C T A G T C
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.839
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 27.3bp
Average Position of motif in Background44.1 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GACTCACGGTGTC------
--TNNNNGGTGTCATNTNT
 A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACTCACGGTGTC-
GTAGGTCACTGGGTCA
 A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C A C G T
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GACTCACGGTGTC-----
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

Ar/MA0007.3/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACTCACGGTGTC---
GGGAACACGGTGTACCC
 A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C A C G T A C G T A C G T
C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C

FOS/MA0476.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GACTCACGGTGTC
TGTGACTCATT-----
 A C G T A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GACTCACGGTGTC
GGATGACTCAT------
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GACTCACGGTGTC
TGACTCA-------
 A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GACTCACGGTGTC-----
--CGCGCCGGGTCACGTA
 A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GACTCACGGTGTC
GGTGACTCATC-----
 A C G T A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GACTCACGGTGTC
ATGACTCATC-----
 A C G T A C G T A C T G C T G A A G T C A C G T A G T C C G T A A G T C C A T G A T C G A G C T A C T G A C G T A G T C
T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T A C G T A C G T A C G T