Information for 3-GGAGACAGCSCCCTCC (Motif 5)

A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
Reverse Opposite:
A T C G A T C G C G T A T A C G A C T G A C T G A T G C A C T G T G A C A G C T A T C G A C G T A G T C G A C T A T G C G T A C
p-value:1e-12
log p-value:-2.883e+01
Information Content per bp:1.717
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 20.7bp
Average Position of motif in Background51.1 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGAGACAGCSCCCTCC
-TTGACAGC-------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGAGACAGCSCCCTCC
-TTGACAGG-------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGACAGCSCCCTCC
VBTGWCAGCB------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGAGACAGCSCCCTCC
GGTGYTGACAGS-------
 A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGACAGCSCCCTCC
GGACACACCCCC----
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:GGAGACAGCSCCCTCC
--------CCCCCCCC
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGACAGCSCCCTCC
CCAGACRSVB------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGACAGCSCCCTCC
CCAGACAG--------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GGAGACAGCSCCCTCC
GATATTGACAGCTGCGT--
 A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGAGACAGCSCCCTCC
-TTGACAG--------
 A C T G A T C G C G T A A C T G G T C A A T G C C T G A A C T G A G T C A T C G G T A C T G A C A G T C C G A T A T G C A T G C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T