Information for 5-AGTGGTTGGCATCTGT (Motif 14)

C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A A C G T A C T G A G T C A G T C C G T A C G T A A G T C A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-1.941e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 9.3bp
Average Position of motif in Background70.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGTGGTTGGCATCTGT
---GGTTGGCAT----
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGTTGGCATCTGT
NGTAGGTTGGCATNNN-
 A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGTGGTTGGCATCTGT
---NNTTGGCANN---
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGTGGTTGGCATCTGT
----NTTGGCANN---
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGTGGTTGGCATCTGT-
-------ACCATCTGTT
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AGTGGTTGGCATCTGT-
-------GCCATCTGTT
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGGTTGGCATCTGT
---NGTGGGCAT----
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGTGGTTGGCATCTGT
-----TTGGCA-----
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGTGGTTGGCATCTGT--
------TGACAGCTGTCA
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AGTGGTTGGCATCTGT-
-------RCCATMTGTT
 C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T