Information for 7-AAAAKAMCAATTA (Motif 10)

C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T G T C A C G T A A C G T A C G T A C T G A C G T A C G T G T A C A G C T A G C T A C G T A C G T
p-value:1e-9
log p-value:-2.168e+01
Information Content per bp:1.907
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.3 +/- 20.7bp
Average Position of motif in Background56.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:AAAAKAMCAATTA----
-AAAAACCAATTAAGAA
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAAAKAMCAATTA
NTTNAGAACAATTA
 A C G T C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAAAKAMCAATTA----
-AACAACCAATTAATTC
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AAAAKAMCAATTA-----
-GAAGACCAATTAGCGCT
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AAAAKAMCAATTA---
-NNNTAACAATTATAN
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAAKAMCAATTA---
TTTAGAACAATAAAAT
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PH0108.1_Msx3/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAAAKAMCAATTA----
-CAAAACCAATTAATTT
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAAKAMCAATTA---
TTAAGAACAATAAATT
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAAKAMCAATTA----
TNNAGAACAATANATNN
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:AAAAKAMCAATTA
-----ACCAATTA
 C G T A C G T A C T G A C T G A A C T G C G T A G T C A G T A C C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A