Information for 7-SCTGTGTGGCCCT (Motif 9)

A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C T A G G T A C A G T C C T G A A G T C C G T A G T A C C T G A A C T G A T G C
p-value:1e-12
log p-value:-2.771e+01
Information Content per bp:1.833
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.5 +/- 19.5bp
Average Position of motif in Background55.6 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SCTGTGTGGCCCT
CGTGGGTGGTCC-
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SCTGTGTGGCCCT
---GTGGGCCCCA
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:SCTGTGTGGCCCT
-CAGTGTGGTCGC
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SCTGTGTGGCCCT
-NNHTGTGGTTWN
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SCTGTGTGGCCCT
-GTCTGTGGTTT-
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:SCTGTGTGGCCCT
-CTTTGT------
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SCTGTGTGGCCCT--
NNGCGTGTGTGCNGCN
 A C G T A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:SCTGTGTGGCCCT
-----GTGACCTT
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-SCTGTGTGGCCCT
GGGGGTGTGTCC--
 A C G T A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SCTGTGTGGCCCT
GCTGTG-------
 A T C G G T A C A G C T A C T G A C G T A C T G A G C T A C T G A C T G A G T C A G T C A G T C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T