Information for 4-CTGCTGGAAAGAA (Motif 7)

A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
Reverse Opposite:
A C G T C G A T G T A C C G A T A C G T C G A T G T A C A G T C C T G A A T C G A G T C C G T A A C T G
p-value:1e-14
log p-value:-3.266e+01
Information Content per bp:1.832
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.8 +/- 31.0bp
Average Position of motif in Background48.2 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGAAAGAA-
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGAAAGAA
NAHCAGCTGD------
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGGAAAGAA
CAGCAGCTGN------
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGAAAGAA
NAACAGCTGG------
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGAAAGAA-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGCTGGAAAGAA-
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGGAAAGAA
ANCAGCTG-------
 A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCTGGAAAGAA
CTTCTGGGAAA--
 A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGGAAAGAA
NNAGCAGCTGCT-----
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTGGAAAGAA
ACAGCTGTTV----
 A C G T A G T C C G A T A C T G A T G C G A C T A C T G A C T G G C T A C G T A C G T A A C T G C G T A G T C A
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T