Information for 8-TGGCAACTCT (Motif 17)

A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C G T A C G T A C T G A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.237e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets69.5 +/- 21.1bp
Average Position of motif in Background37.1 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACTCT
CTTGGCAA----
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGGCAACTCT
SCCTAGCAACAG-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------TGGCAACTCT
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACTCT
NTTGGCANN---
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAACTCT
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCAACTCT
TTGGCA-----
 A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAACTCT
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGCAACTCT
TGTCANYT--
 A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TGGCAACTCT
TTGCCATGGCAACN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACTCT
AATGGAAAAT--
 A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T